Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01852 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01852 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P01852 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
P01852 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
P01852 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01852 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.5■□□□□ 0.23
P01852 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
P01852 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01852 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.5■□□□□ 0.23
P01852 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01852 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
P01852 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
P01852 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01852 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01852 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01852 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01852 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.5■□□□□ 0.23
P01852 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
P01852 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01852 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P01852 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P01852 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P01852 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P01852 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
P01852 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P01852 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
P01852 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P01852 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
P01852 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
P01852 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P01852 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
P01852 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P01852 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
P01852 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.48■□□□□ 0.23
P01852 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.48■□□□□ 0.23
P01852 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
P01852 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
P01852 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P01852 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P01852 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.48■□□□□ 0.23
P01852 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P01852 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P01852 Gm12527-201ENSMUST00000117967 564 ntBASIC16.48■□□□□ 0.23
P01852 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
P01852 Gm2559-201ENSMUST00000201323 363 ntBASIC16.48■□□□□ 0.23
P01852 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
P01852 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P01852 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P01852 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P01852 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P01852 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P01852 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
P01852 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
P01852 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P01852 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P01852 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P01852 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.47■□□□□ 0.23
P01852 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P01852 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P01852 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.46■□□□□ 0.23
P01852 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.46■□□□□ 0.23
P01852 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P01852 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P01852 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.46■□□□□ 0.23
P01852 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
P01852 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P01852 Gm2399-201ENSMUST00000104944 225 ntBASIC16.46■□□□□ 0.23
P01852 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.46■□□□□ 0.23
P01852 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P01852 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P01852 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.46■□□□□ 0.23
P01852 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
P01852 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P01852 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P01852 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
P01852 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P01852 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
P01852 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
P01852 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
P01852 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
P01852 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
P01852 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
P01852 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.45■□□□□ 0.22
P01852 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
P01852 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
P01852 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Gm12896-201ENSMUST00000118430 226 ntBASIC16.45■□□□□ 0.22
P01852 Gm27011-201ENSMUST00000182352 972 ntBASIC16.45■□□□□ 0.22
P01852 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
P01852 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P01852 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms