Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abcd4O89016 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abcd4O89016 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abcd4O89016 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Abcd4O89016 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abcd4O89016 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abcd4O89016 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abcd4O89016 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abcd4O89016 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abcd4O89016 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Abcd4O89016 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Abcd4O89016 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abcd4O89016 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Abcd4O89016 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.31■□□□□ 0.2
Abcd4O89016 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abcd4O89016 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Abcd4O89016 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abcd4O89016 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Abcd4O89016 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Abcd4O89016 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.31■□□□□ 0.2
Abcd4O89016 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Abcd4O89016 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Abcd4O89016 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Abcd4O89016 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abcd4O89016 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abcd4O89016 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Abcd4O89016 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abcd4O89016 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Abcd4O89016 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abcd4O89016 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.3■□□□□ 0.2
Abcd4O89016 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.3■□□□□ 0.2
Abcd4O89016 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Abcd4O89016 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.3■□□□□ 0.2
Abcd4O89016 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.3■□□□□ 0.2
Abcd4O89016 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Abcd4O89016 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Abcd4O89016 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abcd4O89016 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abcd4O89016 Dio3-201ENSMUST00000097228 1449 ntBASIC16.29■□□□□ 0.2
Abcd4O89016 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abcd4O89016 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abcd4O89016 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abcd4O89016 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Abcd4O89016 Gm18666-201ENSMUST00000190039 958 ntBASIC16.29■□□□□ 0.2
Abcd4O89016 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Abcd4O89016 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.29■□□□□ 0.2
Abcd4O89016 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abcd4O89016 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abcd4O89016 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Abcd4O89016 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.29■□□□□ 0.2
Abcd4O89016 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abcd4O89016 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abcd4O89016 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.28■□□□□ 0.2
Abcd4O89016 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abcd4O89016 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abcd4O89016 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.28■□□□□ 0.2
Abcd4O89016 Gm10252-201ENSMUST00000209541 832 ntBASIC16.28■□□□□ 0.2
Abcd4O89016 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.28■□□□□ 0.2
Abcd4O89016 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abcd4O89016 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abcd4O89016 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abcd4O89016 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abcd4O89016 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Abcd4O89016 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Abcd4O89016 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Abcd4O89016 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Abcd4O89016 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Abcd4O89016 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Abcd4O89016 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Abcd4O89016 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Abcd4O89016 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Abcd4O89016 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Abcd4O89016 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abcd4O89016 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Abcd4O89016 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abcd4O89016 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abcd4O89016 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abcd4O89016 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abcd4O89016 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abcd4O89016 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abcd4O89016 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abcd4O89016 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abcd4O89016 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abcd4O89016 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Abcd4O89016 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Abcd4O89016 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.26■□□□□ 0.19
Abcd4O89016 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms