Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cops4O88544 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops4O88544 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops4O88544 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops4O88544 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Cops4O88544 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cops4O88544 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cops4O88544 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cops4O88544 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops4O88544 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops4O88544 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
Cops4O88544 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cops4O88544 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops4O88544 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cops4O88544 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops4O88544 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cops4O88544 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops4O88544 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops4O88544 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops4O88544 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops4O88544 Smad6-203ENSMUST00000179458 273 ntBASIC16.68■□□□□ 0.26
Cops4O88544 Gm27454-201ENSMUST00000185090 204 ntBASIC16.68■□□□□ 0.26
Cops4O88544 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.68■□□□□ 0.26
Cops4O88544 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops4O88544 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cops4O88544 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cops4O88544 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops4O88544 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops4O88544 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cops4O88544 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops4O88544 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cops4O88544 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops4O88544 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops4O88544 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops4O88544 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops4O88544 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cops4O88544 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cops4O88544 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cops4O88544 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops4O88544 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cops4O88544 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops4O88544 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops4O88544 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops4O88544 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops4O88544 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cops4O88544 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cops4O88544 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops4O88544 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops4O88544 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Cops4O88544 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cops4O88544 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops4O88544 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops4O88544 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops4O88544 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops4O88544 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cops4O88544 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.66■□□□□ 0.26
Cops4O88544 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops4O88544 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops4O88544 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops4O88544 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops4O88544 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cops4O88544 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cops4O88544 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cops4O88544 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cops4O88544 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cops4O88544 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.65■□□□□ 0.26
Cops4O88544 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.65■□□□□ 0.26
Cops4O88544 Gm7860-201ENSMUST00000121190 879 ntBASIC16.65■□□□□ 0.26
Cops4O88544 Gm8969-201ENSMUST00000199694 526 ntBASIC16.65■□□□□ 0.26
Cops4O88544 Gm43173-201ENSMUST00000202246 593 ntBASIC16.65■□□□□ 0.26
Cops4O88544 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops4O88544 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cops4O88544 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops4O88544 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.65■□□□□ 0.26
Cops4O88544 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops4O88544 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops4O88544 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops4O88544 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops4O88544 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cops4O88544 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
Cops4O88544 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cops4O88544 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.64■□□□□ 0.25
Cops4O88544 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cops4O88544 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cops4O88544 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cops4O88544 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms