Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10139O88245 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10139O88245 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10139O88245 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10139O88245 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10139O88245 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC11.02□□□□□ -0.65
Gm10139O88245 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10139O88245 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Gm10139O88245 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Gm10139O88245 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC11.02□□□□□ -0.65
Gm10139O88245 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10139O88245 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Gm10139O88245 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Gm10139O88245 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Gm10139O88245 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gm10139O88245 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Gm10139O88245 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.01□□□□□ -0.65
Gm10139O88245 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Gm6420-201ENSMUST00000193885 723 ntBASIC11.01□□□□□ -0.65
Gm10139O88245 Gm42778-201ENSMUST00000199644 553 ntBASIC11.01□□□□□ -0.65
Gm10139O88245 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Gm10139O88245 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC11.01□□□□□ -0.65
Gm10139O88245 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.01□□□□□ -0.65
Gm10139O88245 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gm10139O88245 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Gm10139O88245 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm10139O88245 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC11□□□□□ -0.65
Gm10139O88245 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Gm10139O88245 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Gm10139O88245 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC11□□□□□ -0.65
Gm10139O88245 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Nespas-201ENSMUST00000143738 1083 ntBASIC11□□□□□ -0.65
Gm10139O88245 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC11□□□□□ -0.65
Gm10139O88245 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC11□□□□□ -0.65
Gm10139O88245 Ap3s1-204ENSMUST00000225520 957 ntBASIC11□□□□□ -0.65
Gm10139O88245 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Gm10493-201ENSMUST00000097270 612 ntBASIC11□□□□□ -0.65
Gm10139O88245 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gm10139O88245 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm10139O88245 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Gm10139O88245 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC10.99□□□□□ -0.65
Gm10139O88245 AC099934.2-201ENSMUST00000196389 70 ntBASIC10.99□□□□□ -0.65
Gm10139O88245 AC156953.1-201ENSMUST00000196953 70 ntBASIC10.99□□□□□ -0.65
Gm10139O88245 AC157822.2-201ENSMUST00000200291 70 ntBASIC10.99□□□□□ -0.65
Gm10139O88245 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Gm10139O88245 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Gm10139O88245 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Gm10139O88245 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
Gm10139O88245 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Gm10139O88245 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC10.99□□□□□ -0.65
Gm10139O88245 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gm10139O88245 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm10139O88245 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms