Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.4■□□□□ 0.22
Pdlim3O70209 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.4■□□□□ 0.22
Pdlim3O70209 Gm8969-201ENSMUST00000199694 526 ntBASIC16.4■□□□□ 0.22
Pdlim3O70209 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pdlim3O70209 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pdlim3O70209 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pdlim3O70209 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pdlim3O70209 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Pdlim3O70209 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pdlim3O70209 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pdlim3O70209 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim3O70209 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim3O70209 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim3O70209 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim3O70209 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.39■□□□□ 0.21
Pdlim3O70209 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pdlim3O70209 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim3O70209 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pdlim3O70209 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim3O70209 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim3O70209 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim3O70209 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim3O70209 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim3O70209 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pdlim3O70209 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim3O70209 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim3O70209 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim3O70209 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim3O70209 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim3O70209 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim3O70209 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.38■□□□□ 0.21
Pdlim3O70209 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim3O70209 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim3O70209 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.38■□□□□ 0.21
Pdlim3O70209 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim3O70209 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim3O70209 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim3O70209 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim3O70209 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pdlim3O70209 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim3O70209 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim3O70209 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim3O70209 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim3O70209 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim3O70209 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim3O70209 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim3O70209 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Pdlim3O70209 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim3O70209 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pdlim3O70209 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim3O70209 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim3O70209 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.37■□□□□ 0.21
Pdlim3O70209 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim3O70209 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim3O70209 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim3O70209 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pdlim3O70209 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.36■□□□□ 0.21
Pdlim3O70209 Gm12821-201ENSMUST00000120022 600 ntBASIC16.36■□□□□ 0.21
Pdlim3O70209 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim3O70209 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim3O70209 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim3O70209 Gm6139-201ENSMUST00000079261 882 ntBASIC16.36■□□□□ 0.21
Pdlim3O70209 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim3O70209 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.36■□□□□ 0.21
Pdlim3O70209 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim3O70209 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim3O70209 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim3O70209 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim3O70209 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim3O70209 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim3O70209 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pdlim3O70209 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.35■□□□□ 0.21
Pdlim3O70209 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pdlim3O70209 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim3O70209 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms