Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ldb2O55203 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Ldb2O55203 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ldb2O55203 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.98■□□□□ 0.47
Ldb2O55203 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ldb2O55203 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ldb2O55203 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.97■□□□□ 0.47
Ldb2O55203 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ldb2O55203 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ldb2O55203 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.97■□□□□ 0.47
Ldb2O55203 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ldb2O55203 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ldb2O55203 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.97■□□□□ 0.47
Ldb2O55203 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ldb2O55203 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.97■□□□□ 0.47
Ldb2O55203 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.97■□□□□ 0.47
Ldb2O55203 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ldb2O55203 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ldb2O55203 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ldb2O55203 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ldb2O55203 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.97■□□□□ 0.47
Ldb2O55203 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.97■□□□□ 0.47
Ldb2O55203 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ldb2O55203 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ldb2O55203 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ldb2O55203 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.96■□□□□ 0.47
Ldb2O55203 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ldb2O55203 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.96■□□□□ 0.47
Ldb2O55203 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.96■□□□□ 0.47
Ldb2O55203 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.96■□□□□ 0.47
Ldb2O55203 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ldb2O55203 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ldb2O55203 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ldb2O55203 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
Ldb2O55203 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Ldb2O55203 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Ldb2O55203 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.95■□□□□ 0.46
Ldb2O55203 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Gm4968-201ENSMUST00000071458 858 ntBASIC17.95■□□□□ 0.46
Ldb2O55203 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ldb2O55203 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Ldb2O55203 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ldb2O55203 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.95■□□□□ 0.46
Ldb2O55203 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ldb2O55203 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ldb2O55203 Gm38285-201ENSMUST00000192928 922 ntBASIC17.94■□□□□ 0.46
Ldb2O55203 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.94■□□□□ 0.46
Ldb2O55203 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ldb2O55203 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ldb2O55203 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ldb2O55203 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ldb2O55203 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ldb2O55203 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ldb2O55203 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.93■□□□□ 0.46
Ldb2O55203 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ldb2O55203 Zfp783-201ENSMUST00000095946 670 ntBASIC17.93■□□□□ 0.46
Ldb2O55203 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.93■□□□□ 0.46
Ldb2O55203 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ldb2O55203 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb2O55203 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb2O55203 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb2O55203 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb2O55203 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb2O55203 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ldb2O55203 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.92■□□□□ 0.46
Ldb2O55203 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.92■□□□□ 0.46
Ldb2O55203 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.92■□□□□ 0.46
Ldb2O55203 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.92■□□□□ 0.46
Ldb2O55203 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.92■□□□□ 0.46
Ldb2O55203 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.92■□□□□ 0.46
Ldb2O55203 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb2O55203 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms