Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl13O55038 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl13O55038 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl13O55038 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl13O55038 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl13O55038 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl13O55038 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Cxcl13O55038 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.29■□□□□ 0.04
Cxcl13O55038 Mir5122-201ENSMUST00000175004 89 ntBASIC15.29■□□□□ 0.04
Cxcl13O55038 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.29■□□□□ 0.04
Cxcl13O55038 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cxcl13O55038 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.29■□□□□ 0.04
Cxcl13O55038 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl13O55038 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl13O55038 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.29■□□□□ 0.04
Cxcl13O55038 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl13O55038 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cxcl13O55038 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.29■□□□□ 0.04
Cxcl13O55038 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl13O55038 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cxcl13O55038 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl13O55038 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Cxcl13O55038 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cxcl13O55038 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl13O55038 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl13O55038 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl13O55038 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl13O55038 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cxcl13O55038 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl13O55038 Gm12382-201ENSMUST00000122005 922 ntBASIC15.28■□□□□ 0.04
Cxcl13O55038 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.28■□□□□ 0.04
Cxcl13O55038 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Cxcl13O55038 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.28■□□□□ 0.04
Cxcl13O55038 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.28■□□□□ 0.04
Cxcl13O55038 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Cxcl13O55038 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl13O55038 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl13O55038 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl13O55038 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Cxcl13O55038 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl13O55038 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl13O55038 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cxcl13O55038 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cxcl13O55038 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.27■□□□□ 0.04
Cxcl13O55038 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cxcl13O55038 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.27■□□□□ 0.04
Cxcl13O55038 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl13O55038 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.27■□□□□ 0.03
Cxcl13O55038 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl13O55038 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl13O55038 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl13O55038 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl13O55038 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl13O55038 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl13O55038 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl13O55038 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.27■□□□□ 0.03
Cxcl13O55038 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cxcl13O55038 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl13O55038 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl13O55038 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl13O55038 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl13O55038 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.26■□□□□ 0.03
Cxcl13O55038 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl13O55038 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl13O55038 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.26■□□□□ 0.03
Cxcl13O55038 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl13O55038 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl13O55038 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cxcl13O55038 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.26■□□□□ 0.03
Cxcl13O55038 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cxcl13O55038 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl13O55038 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cxcl13O55038 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl13O55038 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cxcl13O55038 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl13O55038 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl13O55038 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl13O55038 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cxcl13O55038 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl13O55038 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.25■□□□□ 0.03
Cxcl13O55038 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl13O55038 Mir2861-201ENSMUST00000175539 82 ntBASIC15.25■□□□□ 0.03
Cxcl13O55038 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cxcl13O55038 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cxcl13O55038 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl13O55038 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl13O55038 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms