Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prom1O54990 Gm12085-201ENSMUST00000119263 940 ntBASIC20■□□□□ 0.79
Prom1O54990 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20■□□□□ 0.79
Prom1O54990 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20■□□□□ 0.79
Prom1O54990 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20■□□□□ 0.79
Prom1O54990 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prom1O54990 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prom1O54990 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Prom1O54990 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prom1O54990 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Prom1O54990 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.99■□□□□ 0.79
Prom1O54990 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.99■□□□□ 0.79
Prom1O54990 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prom1O54990 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prom1O54990 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prom1O54990 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Prom1O54990 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.99■□□□□ 0.79
Prom1O54990 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prom1O54990 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prom1O54990 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prom1O54990 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.99■□□□□ 0.79
Prom1O54990 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.98■□□□□ 0.79
Prom1O54990 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prom1O54990 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prom1O54990 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prom1O54990 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prom1O54990 Gm10819-201ENSMUST00000099988 561 ntBASIC19.98■□□□□ 0.79
Prom1O54990 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prom1O54990 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prom1O54990 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Prom1O54990 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prom1O54990 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prom1O54990 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.97■□□□□ 0.79
Prom1O54990 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prom1O54990 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Prom1O54990 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.97■□□□□ 0.79
Prom1O54990 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.97■□□□□ 0.79
Prom1O54990 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prom1O54990 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.97■□□□□ 0.79
Prom1O54990 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.97■□□□□ 0.79
Prom1O54990 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prom1O54990 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.97■□□□□ 0.79
Prom1O54990 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Prom1O54990 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prom1O54990 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.96■□□□□ 0.79
Prom1O54990 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prom1O54990 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prom1O54990 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prom1O54990 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prom1O54990 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.96■□□□□ 0.79
Prom1O54990 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prom1O54990 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prom1O54990 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.96■□□□□ 0.79
Prom1O54990 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prom1O54990 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prom1O54990 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Prom1O54990 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prom1O54990 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.95■□□□□ 0.78
Prom1O54990 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prom1O54990 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Prom1O54990 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prom1O54990 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prom1O54990 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.95■□□□□ 0.78
Prom1O54990 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.95■□□□□ 0.78
Prom1O54990 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prom1O54990 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Prom1O54990 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prom1O54990 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prom1O54990 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prom1O54990 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prom1O54990 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prom1O54990 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prom1O54990 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prom1O54990 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prom1O54990 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prom1O54990 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Prom1O54990 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.94■□□□□ 0.78
Prom1O54990 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.94■□□□□ 0.78
Prom1O54990 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prom1O54990 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prom1O54990 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prom1O54990 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prom1O54990 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prom1O54990 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Prom1O54990 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.93■□□□□ 0.78
Prom1O54990 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms