Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.28□□□□□ -0.12
Efnb3O35393 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.28□□□□□ -0.12
Efnb3O35393 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.28□□□□□ -0.12
Efnb3O35393 Gm8969-201ENSMUST00000199694 526 ntBASIC14.28□□□□□ -0.12
Efnb3O35393 Gm43173-201ENSMUST00000202246 593 ntBASIC14.28□□□□□ -0.12
Efnb3O35393 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Efnb3O35393 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Efnb3O35393 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Efnb3O35393 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Efnb3O35393 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Efnb3O35393 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Efnb3O35393 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Efnb3O35393 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Efnb3O35393 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Efnb3O35393 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Efnb3O35393 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Efnb3O35393 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Efnb3O35393 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.27□□□□□ -0.13
Efnb3O35393 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Efnb3O35393 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Efnb3O35393 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Efnb3O35393 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Efnb3O35393 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Efnb3O35393 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Efnb3O35393 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Efnb3O35393 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Efnb3O35393 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.26□□□□□ -0.13
Efnb3O35393 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Efnb3O35393 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Efnb3O35393 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.26□□□□□ -0.13
Efnb3O35393 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.26□□□□□ -0.13
Efnb3O35393 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Efnb3O35393 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Efnb3O35393 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.25□□□□□ -0.13
Efnb3O35393 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Efnb3O35393 Smad6-203ENSMUST00000179458 273 ntBASIC14.25□□□□□ -0.13
Efnb3O35393 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.25□□□□□ -0.13
Efnb3O35393 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Efnb3O35393 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Tgds-204ENSMUST00000228543 1594 ntBASIC14.25□□□□□ -0.13
Efnb3O35393 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.25□□□□□ -0.13
Efnb3O35393 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Efnb3O35393 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.25□□□□□ -0.13
Efnb3O35393 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.24□□□□□ -0.13
Efnb3O35393 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.24□□□□□ -0.13
Efnb3O35393 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.24□□□□□ -0.13
Efnb3O35393 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Efnb3O35393 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms