Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Capn1O35350 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Capn1O35350 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Capn1O35350 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Capn1O35350 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Capn1O35350 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.68■□□□□ 0.26
Capn1O35350 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.68■□□□□ 0.26
Capn1O35350 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.68■□□□□ 0.26
Capn1O35350 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
Capn1O35350 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.68■□□□□ 0.26
Capn1O35350 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capn1O35350 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Capn1O35350 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capn1O35350 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Capn1O35350 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Capn1O35350 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capn1O35350 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capn1O35350 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capn1O35350 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capn1O35350 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Capn1O35350 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capn1O35350 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capn1O35350 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Capn1O35350 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.67■□□□□ 0.26
Capn1O35350 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Capn1O35350 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Capn1O35350 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Capn1O35350 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.66■□□□□ 0.26
Capn1O35350 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.66■□□□□ 0.26
Capn1O35350 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Capn1O35350 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Capn1O35350 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capn1O35350 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Capn1O35350 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Capn1O35350 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Capn1O35350 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capn1O35350 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Capn1O35350 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Capn1O35350 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Capn1O35350 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Capn1O35350 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capn1O35350 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capn1O35350 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capn1O35350 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capn1O35350 Gm11249-201ENSMUST00000117071 859 ntBASIC16.64■□□□□ 0.25
Capn1O35350 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.64■□□□□ 0.25
Capn1O35350 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capn1O35350 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Capn1O35350 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.64■□□□□ 0.25
Capn1O35350 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capn1O35350 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Capn1O35350 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.64■□□□□ 0.25
Capn1O35350 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capn1O35350 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.63■□□□□ 0.25
Capn1O35350 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms