Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cx3cl1O35188 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cx3cl1O35188 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cx3cl1O35188 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cx3cl1O35188 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Cx3cl1O35188 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cx3cl1O35188 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.96■□□□□ 0.31
Cx3cl1O35188 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cx3cl1O35188 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Cx3cl1O35188 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cx3cl1O35188 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Cx3cl1O35188 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cx3cl1O35188 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cl1O35188 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Gm20049-201ENSMUST00000219950 730 ntBASIC16.95■□□□□ 0.3
Cx3cl1O35188 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cx3cl1O35188 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cl1O35188 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cl1O35188 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cl1O35188 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cl1O35188 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.94■□□□□ 0.3
Cx3cl1O35188 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.94■□□□□ 0.3
Cx3cl1O35188 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.94■□□□□ 0.3
Cx3cl1O35188 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cl1O35188 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cl1O35188 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cl1O35188 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cl1O35188 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cl1O35188 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cx3cl1O35188 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Gm12527-201ENSMUST00000117967 564 ntBASIC16.93■□□□□ 0.3
Cx3cl1O35188 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.93■□□□□ 0.3
Cx3cl1O35188 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cl1O35188 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Gm2399-201ENSMUST00000104944 225 ntBASIC16.92■□□□□ 0.3
Cx3cl1O35188 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cl1O35188 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Gm2559-201ENSMUST00000201323 363 ntBASIC16.92■□□□□ 0.3
Cx3cl1O35188 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.92■□□□□ 0.3
Cx3cl1O35188 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.92■□□□□ 0.3
Cx3cl1O35188 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Cx3cl1O35188 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cx3cl1O35188 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.91■□□□□ 0.3
Cx3cl1O35188 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Cx3cl1O35188 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.91■□□□□ 0.3
Cx3cl1O35188 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cx3cl1O35188 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cx3cl1O35188 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms