Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Bhlhe40O35185 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Bhlhe40O35185 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.76■□□□□ 0.43
Bhlhe40O35185 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Bhlhe40O35185 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bhlhe40O35185 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Bhlhe40O35185 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Bhlhe40O35185 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Bhlhe40O35185 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.74■□□□□ 0.43
Bhlhe40O35185 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Bhlhe40O35185 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Bhlhe40O35185 Gm15565-201ENSMUST00000118890 427 ntBASIC17.74■□□□□ 0.43
Bhlhe40O35185 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.74■□□□□ 0.43
Bhlhe40O35185 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.74■□□□□ 0.43
Bhlhe40O35185 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.74■□□□□ 0.43
Bhlhe40O35185 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Bhlhe40O35185 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.74■□□□□ 0.43
Bhlhe40O35185 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Bhlhe40O35185 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Bhlhe40O35185 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Bhlhe40O35185 Gm37292-201ENSMUST00000192062 758 ntBASIC17.73■□□□□ 0.43
Bhlhe40O35185 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.73■□□□□ 0.43
Bhlhe40O35185 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.73■□□□□ 0.43
Bhlhe40O35185 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bhlhe40O35185 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bhlhe40O35185 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Bhlhe40O35185 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bhlhe40O35185 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.73■□□□□ 0.43
Bhlhe40O35185 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bhlhe40O35185 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bhlhe40O35185 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Bhlhe40O35185 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Bhlhe40O35185 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Bhlhe40O35185 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Bhlhe40O35185 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.72■□□□□ 0.43
Bhlhe40O35185 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Bhlhe40O35185 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Bhlhe40O35185 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Bhlhe40O35185 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Bhlhe40O35185 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.72■□□□□ 0.43
Bhlhe40O35185 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Bhlhe40O35185 Mir5122-201ENSMUST00000175004 89 ntBASIC17.72■□□□□ 0.43
Bhlhe40O35185 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.72■□□□□ 0.43
Bhlhe40O35185 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.72■□□□□ 0.43
Bhlhe40O35185 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Bhlhe40O35185 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Bhlhe40O35185 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Bhlhe40O35185 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Bhlhe40O35185 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.72■□□□□ 0.43
Bhlhe40O35185 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.72■□□□□ 0.43
Bhlhe40O35185 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Bhlhe40O35185 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.71■□□□□ 0.43
Bhlhe40O35185 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Bhlhe40O35185 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Bhlhe40O35185 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.71■□□□□ 0.42
Bhlhe40O35185 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.7■□□□□ 0.42
Bhlhe40O35185 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.7■□□□□ 0.42
Bhlhe40O35185 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Bhlhe40O35185 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Bhlhe40O35185 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms