Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Sh2b3O09039 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2b3O09039 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.08■□□□□ 0.16
Sh2b3O09039 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2b3O09039 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2b3O09039 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2b3O09039 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2b3O09039 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2b3O09039 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2b3O09039 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2b3O09039 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2b3O09039 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sh2b3O09039 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2b3O09039 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2b3O09039 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2b3O09039 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sh2b3O09039 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2b3O09039 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2b3O09039 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2b3O09039 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.06■□□□□ 0.16
Sh2b3O09039 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.06■□□□□ 0.16
Sh2b3O09039 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2b3O09039 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.06■□□□□ 0.16
Sh2b3O09039 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.06■□□□□ 0.16
Sh2b3O09039 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.06■□□□□ 0.16
Sh2b3O09039 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.06■□□□□ 0.16
Sh2b3O09039 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Sh2b3O09039 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2b3O09039 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2b3O09039 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2b3O09039 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sh2b3O09039 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sh2b3O09039 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2b3O09039 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Sh2b3O09039 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sh2b3O09039 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2b3O09039 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2b3O09039 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2b3O09039 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2b3O09039 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sh2b3O09039 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.05■□□□□ 0.16
Sh2b3O09039 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2b3O09039 Mir7071-201ENSMUST00000184847 69 ntBASIC16.05■□□□□ 0.16
Sh2b3O09039 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.05■□□□□ 0.16
Sh2b3O09039 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2b3O09039 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2b3O09039 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.05■□□□□ 0.16
Sh2b3O09039 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2b3O09039 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2b3O09039 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.05■□□□□ 0.16
Sh2b3O09039 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Sh2b3O09039 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2b3O09039 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2b3O09039 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2b3O09039 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2b3O09039 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Sh2b3O09039 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.04■□□□□ 0.16
Sh2b3O09039 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.04■□□□□ 0.16
Sh2b3O09039 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2b3O09039 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2b3O09039 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2b3O09039 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2b3O09039 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2b3O09039 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2b3O09039 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Sh2b3O09039 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2b3O09039 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sh2b3O09039 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2b3O09039 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2b3O09039 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2b3O09039 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2b3O09039 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.03■□□□□ 0.16
Sh2b3O09039 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2b3O09039 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.03■□□□□ 0.16
Sh2b3O09039 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.03■□□□□ 0.16
Sh2b3O09039 Mir6982-201ENSMUST00000184354 68 ntBASIC16.03■□□□□ 0.16
Sh2b3O09039 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.03■□□□□ 0.16
Sh2b3O09039 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Sh2b3O09039 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2b3O09039 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2b3O09039 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2b3O09039 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2b3O09039 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sh2b3O09039 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.03■□□□□ 0.16
Sh2b3O09039 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2b3O09039 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2b3O09039 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2b3O09039 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2b3O09039 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2b3O09039 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Sh2b3O09039 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2b3O09039 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2b3O09039 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2b3O09039 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Sh2b3O09039 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.02■□□□□ 0.16
Sh2b3O09039 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh2b3O09039 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh2b3O09039 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sh2b3O09039 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh2b3O09039 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms