Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 Gm43060-201ENSMUST00000200621 289 ntBASIC18.51■□□□□ 0.55
Trove2O08848 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.51■□□□□ 0.55
Trove2O08848 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.51■□□□□ 0.55
Trove2O08848 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trove2O08848 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trove2O08848 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.51■□□□□ 0.55
Trove2O08848 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trove2O08848 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.5■□□□□ 0.55
Trove2O08848 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trove2O08848 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trove2O08848 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trove2O08848 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.49■□□□□ 0.55
Trove2O08848 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.49■□□□□ 0.55
Trove2O08848 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trove2O08848 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trove2O08848 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trove2O08848 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trove2O08848 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trove2O08848 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trove2O08848 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trove2O08848 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trove2O08848 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.48■□□□□ 0.55
Trove2O08848 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Trove2O08848 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trove2O08848 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trove2O08848 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.48■□□□□ 0.55
Trove2O08848 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trove2O08848 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trove2O08848 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.48■□□□□ 0.55
Trove2O08848 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.48■□□□□ 0.55
Trove2O08848 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.48■□□□□ 0.55
Trove2O08848 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trove2O08848 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Trove2O08848 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trove2O08848 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trove2O08848 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trove2O08848 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trove2O08848 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trove2O08848 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trove2O08848 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trove2O08848 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trove2O08848 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trove2O08848 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trove2O08848 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trove2O08848 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trove2O08848 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trove2O08848 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trove2O08848 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.47■□□□□ 0.55
Trove2O08848 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trove2O08848 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trove2O08848 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trove2O08848 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Trove2O08848 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trove2O08848 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trove2O08848 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trove2O08848 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trove2O08848 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trove2O08848 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.46■□□□□ 0.55
Trove2O08848 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trove2O08848 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.46■□□□□ 0.55
Trove2O08848 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Trove2O08848 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trove2O08848 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.46■□□□□ 0.55
Trove2O08848 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms