Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClockO08785 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ClockO08785 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClockO08785 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ClockO08785 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.15■□□□□ 0.34
ClockO08785 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClockO08785 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
ClockO08785 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ClockO08785 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ClockO08785 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClockO08785 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
ClockO08785 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClockO08785 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ClockO08785 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClockO08785 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClockO08785 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClockO08785 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClockO08785 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ClockO08785 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ClockO08785 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
ClockO08785 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ClockO08785 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
ClockO08785 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
ClockO08785 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
ClockO08785 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.14■□□□□ 0.33
ClockO08785 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ClockO08785 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ClockO08785 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.14■□□□□ 0.33
ClockO08785 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ClockO08785 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClockO08785 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClockO08785 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClockO08785 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClockO08785 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClockO08785 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClockO08785 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.13■□□□□ 0.33
ClockO08785 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.13■□□□□ 0.33
ClockO08785 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ClockO08785 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.13■□□□□ 0.33
ClockO08785 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClockO08785 Spcs1-204ENSMUST00000226782 949 ntBASIC17.13■□□□□ 0.33
ClockO08785 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.13■□□□□ 0.33
ClockO08785 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ClockO08785 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClockO08785 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ClockO08785 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ClockO08785 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClockO08785 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ClockO08785 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ClockO08785 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.12■□□□□ 0.33
ClockO08785 Gm8969-201ENSMUST00000199694 526 ntBASIC17.12■□□□□ 0.33
ClockO08785 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClockO08785 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.12■□□□□ 0.33
ClockO08785 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ClockO08785 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClockO08785 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClockO08785 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClockO08785 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ClockO08785 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClockO08785 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ClockO08785 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClockO08785 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClockO08785 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.11■□□□□ 0.33
ClockO08785 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClockO08785 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClockO08785 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClockO08785 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ClockO08785 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.11■□□□□ 0.33
ClockO08785 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.11■□□□□ 0.33
ClockO08785 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClockO08785 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClockO08785 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClockO08785 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClockO08785 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ClockO08785 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ClockO08785 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.1■□□□□ 0.33
ClockO08785 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ClockO08785 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ClockO08785 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms