Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Raet1cO08604 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1cO08604 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Raet1cO08604 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Raet1cO08604 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.12■□□□□ 0.17
Raet1cO08604 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Raet1cO08604 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Raet1cO08604 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Raet1cO08604 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1cO08604 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1cO08604 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1cO08604 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Raet1cO08604 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1cO08604 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1cO08604 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1cO08604 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1cO08604 Fst-202ENSMUST00000223640 2612 ntBASIC16.11■□□□□ 0.17
Raet1cO08604 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1cO08604 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.11■□□□□ 0.17
Raet1cO08604 Gm6211-202ENSMUST00000167849 925 ntBASIC16.11■□□□□ 0.17
Raet1cO08604 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1cO08604 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Raet1cO08604 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1cO08604 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.11■□□□□ 0.17
Raet1cO08604 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Raet1cO08604 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1cO08604 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1cO08604 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Raet1cO08604 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Raet1cO08604 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.1■□□□□ 0.17
Raet1cO08604 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.1■□□□□ 0.17
Raet1cO08604 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.1■□□□□ 0.17
Raet1cO08604 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.1■□□□□ 0.17
Raet1cO08604 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1cO08604 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Raet1cO08604 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Raet1cO08604 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Raet1cO08604 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.09■□□□□ 0.17
Raet1cO08604 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.09■□□□□ 0.17
Raet1cO08604 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Raet1cO08604 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Raet1cO08604 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1cO08604 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1cO08604 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1cO08604 Gm37179-201ENSMUST00000194862 823 ntBASIC16.08■□□□□ 0.16
Raet1cO08604 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1cO08604 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1cO08604 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1cO08604 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1cO08604 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1cO08604 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.08■□□□□ 0.16
Raet1cO08604 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.08■□□□□ 0.16
Raet1cO08604 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1cO08604 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1cO08604 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1cO08604 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Raet1cO08604 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Raet1cO08604 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms