Protein–RNA interactions for Protein: J3QMM8

Gm7971, Predicted gene 16429, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm7971J3QMM8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Gm7971J3QMM8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm7971J3QMM8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Gm7971J3QMM8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Gm7971J3QMM8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm7971J3QMM8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm7971J3QMM8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm7971J3QMM8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm7971J3QMM8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm7971J3QMM8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm7971J3QMM8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm7971J3QMM8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm7971J3QMM8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm7971J3QMM8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.57■□□□□ 0.4
Gm7971J3QMM8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm7971J3QMM8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm7971J3QMM8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm7971J3QMM8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm7971J3QMM8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Gm7971J3QMM8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm7971J3QMM8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm7971J3QMM8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm7971J3QMM8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm7971J3QMM8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm7971J3QMM8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Gm7971J3QMM8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm7971J3QMM8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.56■□□□□ 0.4
Gm7971J3QMM8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm7971J3QMM8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm7971J3QMM8 Gm9988-201ENSMUST00000069786 435 ntBASIC17.56■□□□□ 0.4
Gm7971J3QMM8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm7971J3QMM8 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.56■□□□□ 0.4
Gm7971J3QMM8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm7971J3QMM8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm7971J3QMM8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm7971J3QMM8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.55■□□□□ 0.4
Gm7971J3QMM8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm7971J3QMM8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm7971J3QMM8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm7971J3QMM8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm7971J3QMM8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm7971J3QMM8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm7971J3QMM8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm7971J3QMM8 Reep4-203ENSMUST00000226563 1444 ntBASIC17.54■□□□□ 0.4
Gm7971J3QMM8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm7971J3QMM8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm7971J3QMM8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm7971J3QMM8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Tgds-204ENSMUST00000228543 1594 ntBASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Gm13146-201ENSMUST00000118508 780 ntBASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm7971J3QMM8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm7971J3QMM8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm7971J3QMM8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Gm7971J3QMM8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm7971J3QMM8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm7971J3QMM8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm7971J3QMM8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.52■□□□□ 0.4
Gm7971J3QMM8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Gm7971J3QMM8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Gm7971J3QMM8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Gm7971J3QMM8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Gm7971J3QMM8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Gm7971J3QMM8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm7971J3QMM8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Gm7971J3QMM8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms