Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3139J3QK78 Gm15375-201ENSMUST00000119510 849 ntBASIC18.01■□□□□ 0.47
Gm3139J3QK78 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3139J3QK78 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3139J3QK78 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Gm3139J3QK78 Gm10698-201ENSMUST00000182663 604 ntBASIC18.01■□□□□ 0.47
Gm3139J3QK78 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3139J3QK78 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.01■□□□□ 0.47
Gm3139J3QK78 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3139J3QK78 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3139J3QK78 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3139J3QK78 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3139J3QK78 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3139J3QK78 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm3139J3QK78 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3139J3QK78 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3139J3QK78 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18■□□□□ 0.47
Gm3139J3QK78 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3139J3QK78 Mir6349-201ENSMUST00000184059 97 ntBASIC18■□□□□ 0.47
Gm3139J3QK78 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3139J3QK78 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3139J3QK78 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gm3139J3QK78 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3139J3QK78 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3139J3QK78 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3139J3QK78 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm3139J3QK78 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3139J3QK78 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm3139J3QK78 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18■□□□□ 0.47
Gm3139J3QK78 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3139J3QK78 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3139J3QK78 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3139J3QK78 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3139J3QK78 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Gm3139J3QK78 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3139J3QK78 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3139J3QK78 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.99■□□□□ 0.47
Gm3139J3QK78 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.99■□□□□ 0.47
Gm3139J3QK78 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3139J3QK78 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3139J3QK78 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3139J3QK78 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm3139J3QK78 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.99■□□□□ 0.47
Gm3139J3QK78 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.98■□□□□ 0.47
Gm3139J3QK78 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Tgds-204ENSMUST00000228543 1594 ntBASIC17.98■□□□□ 0.47
Gm3139J3QK78 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm3139J3QK78 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.97■□□□□ 0.47
Gm3139J3QK78 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Gm3139J3QK78 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3139J3QK78 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3139J3QK78 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm3139J3QK78 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Gm3139J3QK78 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Gm3139J3QK78 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Gm3139J3QK78 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.96■□□□□ 0.47
Gm3139J3QK78 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.96■□□□□ 0.47
Gm3139J3QK78 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.96■□□□□ 0.47
Gm3139J3QK78 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3139J3QK78 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3139J3QK78 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3139J3QK78 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm3139J3QK78 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Gm3139J3QK78 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Gm3139J3QK78 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.96■□□□□ 0.46
Gm3139J3QK78 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Gm3139J3QK78 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms