Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh1F7BJK1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh1F7BJK1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh1F7BJK1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh1F7BJK1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdh1F7BJK1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh1F7BJK1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh1F7BJK1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh1F7BJK1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Gm13146-201ENSMUST00000118508 780 ntBASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh1F7BJK1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh1F7BJK1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh1F7BJK1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdh1F7BJK1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh1F7BJK1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh1F7BJK1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Pcdh1F7BJK1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh1F7BJK1 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.22■□□□□ 0.19
Pcdh1F7BJK1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh1F7BJK1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh1F7BJK1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms