Protein–RNA interactions for Protein: F6VCN9

Gm5861, Predicted gene 5861 (Fragment), mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5861F6VCN9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5861F6VCN9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5861F6VCN9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5861F6VCN9 Gm13146-201ENSMUST00000118508 780 ntBASIC17.4■□□□□ 0.38
Gm5861F6VCN9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5861F6VCN9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Gm5861F6VCN9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.4■□□□□ 0.38
Gm5861F6VCN9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm5861F6VCN9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.4■□□□□ 0.38
Gm5861F6VCN9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Gm5861F6VCN9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm5861F6VCN9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5861F6VCN9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5861F6VCN9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.38■□□□□ 0.37
Gm5861F6VCN9 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.38■□□□□ 0.37
Gm5861F6VCN9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Gm5861F6VCN9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5861F6VCN9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5861F6VCN9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5861F6VCN9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5861F6VCN9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5861F6VCN9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.38■□□□□ 0.37
Gm5861F6VCN9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Gm5861F6VCN9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5861F6VCN9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Gm5861F6VCN9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Gm8495-201ENSMUST00000188740 694 ntBASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Gm10033-202ENSMUST00000211874 928 ntBASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Gm5861F6VCN9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.36■□□□□ 0.37
Gm5861F6VCN9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5861F6VCN9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5861F6VCN9 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.35■□□□□ 0.37
Gm5861F6VCN9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5861F6VCN9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5861F6VCN9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Gm5861F6VCN9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5861F6VCN9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5861F6VCN9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms