Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Gm7290-201ENSMUST00000104990 617 ntBASIC18.55■□□□□ 0.56
Atf6F6VAN0 Gm12918-201ENSMUST00000120234 636 ntBASIC18.55■□□□□ 0.56
Atf6F6VAN0 Gm15710-201ENSMUST00000121821 636 ntBASIC18.55■□□□□ 0.56
Atf6F6VAN0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Gm5075-201ENSMUST00000196916 622 ntBASIC18.55■□□□□ 0.56
Atf6F6VAN0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.55■□□□□ 0.56
Atf6F6VAN0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.55■□□□□ 0.56
Atf6F6VAN0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf6F6VAN0 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.54■□□□□ 0.56
Atf6F6VAN0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.54■□□□□ 0.56
Atf6F6VAN0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.54■□□□□ 0.56
Atf6F6VAN0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Atf6F6VAN0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.53■□□□□ 0.56
Atf6F6VAN0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6F6VAN0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atf6F6VAN0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atf6F6VAN0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
Atf6F6VAN0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atf6F6VAN0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atf6F6VAN0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atf6F6VAN0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.52■□□□□ 0.56
Atf6F6VAN0 Gm37179-201ENSMUST00000194862 823 ntBASIC18.52■□□□□ 0.56
Atf6F6VAN0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atf6F6VAN0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Atf6F6VAN0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Atf6F6VAN0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Atf6F6VAN0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.52■□□□□ 0.55
Atf6F6VAN0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Atf6F6VAN0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Atf6F6VAN0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6F6VAN0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6F6VAN0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Atf6F6VAN0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6F6VAN0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Atf6F6VAN0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6F6VAN0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6F6VAN0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Atf6F6VAN0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.51■□□□□ 0.55
Atf6F6VAN0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6F6VAN0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atf6F6VAN0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Atf6F6VAN0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Atf6F6VAN0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Atf6F6VAN0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf6F6VAN0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Atf6F6VAN0 Mir5133-201ENSMUST00000174955 77 ntBASIC18.5■□□□□ 0.55
Atf6F6VAN0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Atf6F6VAN0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf6F6VAN0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atf6F6VAN0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Atf6F6VAN0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Atf6F6VAN0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Atf6F6VAN0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms