Protein–RNA interactions for Protein: D3YY23

Lonrf1, LON peptidase N-terminal domain and RING finger protein 1, mousemouse

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf1D3YY23 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lonrf1D3YY23 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Lonrf1D3YY23 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf1D3YY23 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lonrf1D3YY23 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lonrf1D3YY23 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lonrf1D3YY23 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Lonrf1D3YY23 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lonrf1D3YY23 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lonrf1D3YY23 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lonrf1D3YY23 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lonrf1D3YY23 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lonrf1D3YY23 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.61■□□□□ 0.57
Lonrf1D3YY23 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lonrf1D3YY23 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Lonrf1D3YY23 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lonrf1D3YY23 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.59■□□□□ 0.57
Lonrf1D3YY23 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Gm7514-201ENSMUST00000209475 934 ntBASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Gm10033-202ENSMUST00000211874 928 ntBASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lonrf1D3YY23 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lonrf1D3YY23 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lonrf1D3YY23 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Lonrf1D3YY23 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.58■□□□□ 0.57
Lonrf1D3YY23 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Lonrf1D3YY23 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lonrf1D3YY23 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lonrf1D3YY23 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lonrf1D3YY23 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.58■□□□□ 0.56
Lonrf1D3YY23 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lonrf1D3YY23 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lonrf1D3YY23 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lonrf1D3YY23 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms