Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Gm5874-201ENSMUST00000096101 508 ntBASIC15.28■□□□□ 0.04
Mmp27D3YV89 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mmp27D3YV89 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp27D3YV89 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp27D3YV89 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp27D3YV89 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp27D3YV89 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp27D3YV89 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp27D3YV89 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.27■□□□□ 0.04
Mmp27D3YV89 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.27■□□□□ 0.04
Mmp27D3YV89 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp27D3YV89 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp27D3YV89 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp27D3YV89 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp27D3YV89 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp27D3YV89 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.27■□□□□ 0.04
Mmp27D3YV89 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mmp27D3YV89 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.27■□□□□ 0.03
Mmp27D3YV89 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp27D3YV89 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp27D3YV89 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.27■□□□□ 0.03
Mmp27D3YV89 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Mmp27D3YV89 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp27D3YV89 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.25■□□□□ 0.03
Mmp27D3YV89 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Gm10493-201ENSMUST00000097270 612 ntBASIC15.25■□□□□ 0.03
Mmp27D3YV89 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.25■□□□□ 0.03
Mmp27D3YV89 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp27D3YV89 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp27D3YV89 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.24■□□□□ 0.03
Mmp27D3YV89 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.24■□□□□ 0.03
Mmp27D3YV89 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp27D3YV89 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms