Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hist1h2abC0HKE1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hist1h2abC0HKE1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hist1h2abC0HKE1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Hist1h2abC0HKE1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hist1h2abC0HKE1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hist1h2abC0HKE1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Hist1h2abC0HKE1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hist1h2abC0HKE1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hist1h2abC0HKE1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hist1h2abC0HKE1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hist1h2abC0HKE1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Hist1h2abC0HKE1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.56■□□□□ 0.24
Hist1h2abC0HKE1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hist1h2abC0HKE1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hist1h2abC0HKE1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hist1h2abC0HKE1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hist1h2abC0HKE1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hist1h2abC0HKE1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Gm42642-201ENSMUST00000200683 355 ntBASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hist1h2abC0HKE1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2abC0HKE1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Hist1h2abC0HKE1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2abC0HKE1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2abC0HKE1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2abC0HKE1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2abC0HKE1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2abC0HKE1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hist1h2abC0HKE1 Gm5874-201ENSMUST00000096101 508 ntBASIC16.52■□□□□ 0.24
Hist1h2abC0HKE1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h2abC0HKE1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2abC0HKE1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2abC0HKE1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2abC0HKE1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2abC0HKE1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2abC0HKE1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Hist1h2abC0HKE1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2abC0HKE1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h2abC0HKE1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Hist1h2abC0HKE1 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.51■□□□□ 0.23
Hist1h2abC0HKE1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2abC0HKE1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2abC0HKE1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms