Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.65□□□□□ -0.06
Gm12887B1AVM1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Gm12887B1AVM1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gm12887B1AVM1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm12887B1AVM1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm12887B1AVM1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm12887B1AVM1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Gm12887B1AVM1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm12887B1AVM1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Gm12887B1AVM1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm12887B1AVM1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.6□□□□□ -0.07
Gm12887B1AVM1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.6□□□□□ -0.07
Gm12887B1AVM1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.6□□□□□ -0.07
Gm12887B1AVM1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm12887B1AVM1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm12887B1AVM1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm12887B1AVM1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms