Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.67■□□□□ 0.74
Ttc38A3KMP2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc38A3KMP2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc38A3KMP2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc38A3KMP2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc38A3KMP2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ttc38A3KMP2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.66■□□□□ 0.74
Ttc38A3KMP2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ttc38A3KMP2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc38A3KMP2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Gm44549-201ENSMUST00000208351 577 ntBASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Rab3c-203ENSMUST00000224180 967 ntBASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc38A3KMP2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Ttc38A3KMP2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ttc38A3KMP2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ttc38A3KMP2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc38A3KMP2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.64■□□□□ 0.73
Ttc38A3KMP2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc38A3KMP2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc38A3KMP2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc38A3KMP2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc38A3KMP2 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.64■□□□□ 0.73
Ttc38A3KMP2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc38A3KMP2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ttc38A3KMP2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ttc38A3KMP2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc38A3KMP2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc38A3KMP2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ttc38A3KMP2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc38A3KMP2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ttc38A3KMP2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc38A3KMP2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc38A3KMP2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc38A3KMP2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc38A3KMP2 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Gm2399-201ENSMUST00000104944 225 ntBASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ttc38A3KMP2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ttc38A3KMP2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Ttc38A3KMP2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc38A3KMP2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc38A3KMP2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc38A3KMP2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc38A3KMP2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.61■□□□□ 0.73
Ttc38A3KMP2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ttc38A3KMP2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ttc38A3KMP2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc38A3KMP2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc38A3KMP2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc38A3KMP2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Ttc38A3KMP2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ttc38A3KMP2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc38A3KMP2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.6■□□□□ 0.73
Ttc38A3KMP2 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.6■□□□□ 0.73
Ttc38A3KMP2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms