Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chd6A3KFM7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Gm8000-201ENSMUST00000188378 592 ntBASIC14.75□□□□□ -0.05
Chd6A3KFM7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.75□□□□□ -0.05
Chd6A3KFM7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Chd6A3KFM7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.74□□□□□ -0.05
Chd6A3KFM7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Gm13474-201ENSMUST00000122466 815 ntBASIC14.74□□□□□ -0.05
Chd6A3KFM7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.74□□□□□ -0.05
Chd6A3KFM7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.74□□□□□ -0.05
Chd6A3KFM7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Zfp783-201ENSMUST00000095946 670 ntBASIC14.73□□□□□ -0.05
Chd6A3KFM7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd6A3KFM7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.72□□□□□ -0.05
Chd6A3KFM7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.72□□□□□ -0.05
Chd6A3KFM7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd6A3KFM7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd6A3KFM7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd6A3KFM7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Chd6A3KFM7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Chd6A3KFM7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd6A3KFM7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Chd6A3KFM7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Chd6A3KFM7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
Chd6A3KFM7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Chd6A3KFM7 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.71□□□□□ -0.05
Chd6A3KFM7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd6A3KFM7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Chd6A3KFM7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chd6A3KFM7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Chd6A3KFM7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.71□□□□□ -0.06
Chd6A3KFM7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Chd6A3KFM7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chd6A3KFM7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.71□□□□□ -0.06
Chd6A3KFM7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chd6A3KFM7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.7□□□□□ -0.06
Chd6A3KFM7 Gm45328-201ENSMUST00000210942 917 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms