Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm3854A0A1B0GSS6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm3854A0A1B0GSS6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm3854A0A1B0GSS6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm3854A0A1B0GSS6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm3854A0A1B0GSS6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3854A0A1B0GSS6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3854A0A1B0GSS6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3854A0A1B0GSS6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3854A0A1B0GSS6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.09■□□□□ 0.49
Gm3854A0A1B0GSS6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.09■□□□□ 0.49
Gm3854A0A1B0GSS6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Gm3854A0A1B0GSS6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Gm3854A0A1B0GSS6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3854A0A1B0GSS6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3854A0A1B0GSS6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.09■□□□□ 0.49
Gm3854A0A1B0GSS6 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.09■□□□□ 0.49
Gm3854A0A1B0GSS6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm3854A0A1B0GSS6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm3854A0A1B0GSS6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.08■□□□□ 0.49
Gm3854A0A1B0GSS6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Gm3854A0A1B0GSS6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3854A0A1B0GSS6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.08■□□□□ 0.48
Gm3854A0A1B0GSS6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3854A0A1B0GSS6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3854A0A1B0GSS6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.08■□□□□ 0.48
Gm3854A0A1B0GSS6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.08■□□□□ 0.48
Gm3854A0A1B0GSS6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3854A0A1B0GSS6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3854A0A1B0GSS6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.06■□□□□ 0.48
Gm3854A0A1B0GSS6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3854A0A1B0GSS6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3854A0A1B0GSS6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3854A0A1B0GSS6 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.06■□□□□ 0.48
Gm3854A0A1B0GSS6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Gm3854A0A1B0GSS6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3854A0A1B0GSS6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3854A0A1B0GSS6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3854A0A1B0GSS6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.06■□□□□ 0.48
Gm3854A0A1B0GSS6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3854A0A1B0GSS6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3854A0A1B0GSS6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3854A0A1B0GSS6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3854A0A1B0GSS6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms