Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc194A0A140LIT1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc194A0A140LIT1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Ccdc194A0A140LIT1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ccdc194A0A140LIT1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18■□□□□ 0.47
Ccdc194A0A140LIT1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18■□□□□ 0.47
Ccdc194A0A140LIT1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc194A0A140LIT1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc194A0A140LIT1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc194A0A140LIT1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc194A0A140LIT1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccdc194A0A140LIT1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc194A0A140LIT1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ccdc194A0A140LIT1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ccdc194A0A140LIT1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc194A0A140LIT1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc194A0A140LIT1 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.97■□□□□ 0.47
Ccdc194A0A140LIT1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc194A0A140LIT1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ccdc194A0A140LIT1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc194A0A140LIT1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc194A0A140LIT1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc194A0A140LIT1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc194A0A140LIT1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc194A0A140LIT1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc194A0A140LIT1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc194A0A140LIT1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc194A0A140LIT1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc194A0A140LIT1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc194A0A140LIT1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Ccdc194A0A140LIT1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc194A0A140LIT1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc194A0A140LIT1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc194A0A140LIT1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc194A0A140LIT1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc194A0A140LIT1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Fst-202ENSMUST00000223640 2612 ntBASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc194A0A140LIT1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc194A0A140LIT1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms