Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm8969-201ENSMUST00000199694 526 ntBASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7514-201ENSMUST00000209475 934 ntBASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10033-202ENSMUST00000211874 928 ntBASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms