Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav23A0A0G2JG17 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav23A0A0G2JG17 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav23A0A0G2JG17 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav23A0A0G2JG17 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav23A0A0G2JG17 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav23A0A0G2JG17 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav23A0A0G2JG17 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav23A0A0G2JG17 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav23A0A0G2JG17 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav23A0A0G2JG17 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav23A0A0G2JG17 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.79□□□□□ -0.04
Trav23A0A0G2JG17 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav23A0A0G2JG17 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav23A0A0G2JG17 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav23A0A0G2JG17 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav23A0A0G2JG17 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav23A0A0G2JG17 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav23A0A0G2JG17 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav23A0A0G2JG17 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.77□□□□□ -0.04
Trav23A0A0G2JG17 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav23A0A0G2JG17 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav23A0A0G2JG17 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav23A0A0G2JG17 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav23A0A0G2JG17 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav23A0A0G2JG17 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav23A0A0G2JG17 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.77□□□□□ -0.05
Trav23A0A0G2JG17 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav23A0A0G2JG17 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms