Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav19A0A0B4J1K4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav19A0A0B4J1K4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav19A0A0B4J1K4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav19A0A0B4J1K4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav19A0A0B4J1K4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav19A0A0B4J1K4 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.52□□□□□ -0.24
Trav19A0A0B4J1K4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav19A0A0B4J1K4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav19A0A0B4J1K4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav19A0A0B4J1K4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav19A0A0B4J1K4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Gm8493-201ENSMUST00000196881 489 ntBASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Gm8969-201ENSMUST00000199694 526 ntBASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav19A0A0B4J1K4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav19A0A0B4J1K4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav19A0A0B4J1K4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav19A0A0B4J1K4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav19A0A0B4J1K4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav19A0A0B4J1K4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms