Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv19A0A0B4J1H4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv19A0A0B4J1H4 Tgds-204ENSMUST00000228543 1594 ntBASIC14.52□□□□□ -0.08
Trbv19A0A0B4J1H4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv19A0A0B4J1H4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trbv19A0A0B4J1H4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv19A0A0B4J1H4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trbv19A0A0B4J1H4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv19A0A0B4J1H4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv19A0A0B4J1H4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv19A0A0B4J1H4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv19A0A0B4J1H4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv19A0A0B4J1H4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv19A0A0B4J1H4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trbv19A0A0B4J1H4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv19A0A0B4J1H4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.52□□□□□ -0.09
Trbv19A0A0B4J1H4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv19A0A0B4J1H4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv19A0A0B4J1H4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv19A0A0B4J1H4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv19A0A0B4J1H4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv19A0A0B4J1H4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Trbv19A0A0B4J1H4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trbv19A0A0B4J1H4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.51□□□□□ -0.09
Trbv19A0A0B4J1H4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv19A0A0B4J1H4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv19A0A0B4J1H4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv19A0A0B4J1H4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv19A0A0B4J1H4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv19A0A0B4J1H4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Gm7514-201ENSMUST00000209475 934 ntBASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Gm18671-201ENSMUST00000214826 683 ntBASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv19A0A0B4J1H4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Gm22325-201ENSMUST00000158904 308 ntBASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Gm10033-202ENSMUST00000211874 928 ntBASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trbv19A0A0B4J1H4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv19A0A0B4J1H4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Gm42642-201ENSMUST00000200683 355 ntBASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms