Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.11□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv13-3A0A0B4J1H2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.06□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-3A0A0B4J1H2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.06□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.06□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-3A0A0B4J1H2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms