Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv2A0A0B4J1G8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv2A0A0B4J1G8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trbv2A0A0B4J1G8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv2A0A0B4J1G8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv2A0A0B4J1G8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv2A0A0B4J1G8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv2A0A0B4J1G8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv2A0A0B4J1G8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv2A0A0B4J1G8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv2A0A0B4J1G8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv2A0A0B4J1G8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv2A0A0B4J1G8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv2A0A0B4J1G8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv2A0A0B4J1G8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.02■□□□□ 0.16
Trbv2A0A0B4J1G8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv2A0A0B4J1G8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv2A0A0B4J1G8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trbv2A0A0B4J1G8 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.02■□□□□ 0.15
Trbv2A0A0B4J1G8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv2A0A0B4J1G8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms