Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.09■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Sirpb1aA0A0A6YYP6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sirpb1aA0A0A6YYP6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms