Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Mir7071-201ENSMUST00000184847 69 ntBASIC16.68■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Gm12382-201ENSMUST00000122005 922 ntBASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Gm37055-201ENSMUST00000191866 133 ntBASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Mir5122-201ENSMUST00000175004 89 ntBASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Mir2861-201ENSMUST00000175539 82 ntBASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-43A0A0A6YXN5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.65■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ighv1-43A0A0A6YXN5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.65■□□□□ 0.26
Ighv1-43A0A0A6YXN5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.64■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.64■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms