Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13-4-dv7A0A075B6C2 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.46□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm8493-201ENSMUST00000196881 489 ntBASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.44□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm40848-201ENSMUST00000221998 324 ntBASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms