Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
Trav6-5A0A075B6B5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-5A0A075B6B5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-5A0A075B6B5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-5A0A075B6B5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-5A0A075B6B5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-5A0A075B6B5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-5A0A075B6B5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-5A0A075B6B5 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-5A0A075B6B5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Haglr-201ENSMUST00000100000 2085 ntBASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6-5A0A075B6B5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-5A0A075B6B5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-5A0A075B6B5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-5A0A075B6B5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms