Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-6A0A075B6B2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-6A0A075B6B2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-6A0A075B6B2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav6n-6A0A075B6B2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-6A0A075B6B2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-6A0A075B6B2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6n-6A0A075B6B2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6n-6A0A075B6B2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6n-6A0A075B6B2 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.46□□□□□ -0.26
Trav6n-6A0A075B6B2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6n-6A0A075B6B2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6n-6A0A075B6B2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6n-6A0A075B6B2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6n-6A0A075B6B2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trav6n-6A0A075B6B2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6n-6A0A075B6B2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Gm40848-201ENSMUST00000221998 324 ntBASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6n-6A0A075B6B2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms