Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16A0A075B653 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Trav16A0A075B653 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.96□□□□□ -0.17
Trav16A0A075B653 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16A0A075B653 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav16A0A075B653 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav16A0A075B653 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav16A0A075B653 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.96□□□□□ -0.18
Trav16A0A075B653 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav16A0A075B653 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.95□□□□□ -0.18
Trav16A0A075B653 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Gm12922-201ENSMUST00000120626 809 ntBASIC13.95□□□□□ -0.18
Trav16A0A075B653 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16A0A075B653 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16A0A075B653 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav16A0A075B653 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.94□□□□□ -0.18
Trav16A0A075B653 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16A0A075B653 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.94□□□□□ -0.18
Trav16A0A075B653 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16A0A075B653 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.93□□□□□ -0.18
Trav16A0A075B653 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.93□□□□□ -0.18
Trav16A0A075B653 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.93□□□□□ -0.18
Trav16A0A075B653 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16A0A075B653 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms