Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 Gm7860-201ENSMUST00000121190 879 ntBASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.15□□□□□ -0.46
Trav13-2A0A075B649 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13-2A0A075B649 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-2A0A075B649 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-2A0A075B649 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13-2A0A075B649 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms