Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Cap2-205ENSMUST00000225824 1634 ntBASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav8-1A0A075B641 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Gm40881-201ENSMUST00000223397 166 ntBASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8-1A0A075B641 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8-1A0A075B641 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8-1A0A075B641 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav8-1A0A075B641 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav8-1A0A075B641 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav8-1A0A075B641 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav8-1A0A075B641 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav8-1A0A075B641 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms