Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7n-4A0A075B620 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav7n-4A0A075B620 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7n-4A0A075B620 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7n-4A0A075B620 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7n-4A0A075B620 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Trav7n-4A0A075B620 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.71□□□□□ -0.22
Trav7n-4A0A075B620 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7n-4A0A075B620 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Gm5921-201ENSMUST00000075898 882 ntBASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Cap2-205ENSMUST00000225824 1634 ntBASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7n-4A0A075B620 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7n-4A0A075B620 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7n-4A0A075B620 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms