Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-1A0A075B606 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Gm12896-201ENSMUST00000118430 226 ntBASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-1A0A075B606 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Gm2559-201ENSMUST00000201323 363 ntBASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-1A0A075B606 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 Gm27275-201ENSMUST00000184318 272 ntBASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 Grk6-206ENSMUST00000224995 2971 ntBASIC13.21□□□□□ -0.29
Trav13d-1A0A075B606 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-1A0A075B606 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-1A0A075B606 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-1A0A075B606 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-1A0A075B606 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-1A0A075B606 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms