Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim39Q9ESN2 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Trim39Q9ESN2 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim39Q9ESN2 Gm19031-201ENSMUST00000176280 1365 ntBASIC7.02□□□□□ -1.29
Trim39Q9ESN2 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim39Q9ESN2 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim39Q9ESN2 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
Trim39Q9ESN2 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim39Q9ESN2 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Trim39Q9ESN2 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim39Q9ESN2 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim39Q9ESN2 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim39Q9ESN2 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 AC107232.1-201ENSMUST00000227785 1503 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm37569-201ENSMUST00000192111 1722 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm24835-201ENSMUST00000116777 111 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm11926-201ENSMUST00000118520 430 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm5390-201ENSMUST00000119069 1230 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm15753-201ENSMUST00000119241 1062 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm12611-201ENSMUST00000119452 1037 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm12993-201ENSMUST00000119900 479 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm15193-201ENSMUST00000120224 865 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm7571-201ENSMUST00000120252 927 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm14125-202ENSMUST00000120921 756 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm11258-201ENSMUST00000121086 1218 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm12692-201ENSMUST00000121092 546 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm7973-201ENSMUST00000122107 488 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm24236-201ENSMUST00000157794 134 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm25372-201ENSMUST00000158161 255 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm25898-201ENSMUST00000158303 106 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm26468-201ENSMUST00000158644 106 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm7316-201ENSMUST00000165395 445 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm26505-201ENSMUST00000176208 166 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm27905-201ENSMUST00000184005 207 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Mir6415-201ENSMUST00000184064 100 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm37506-201ENSMUST00000192008 143 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm43287-201ENSMUST00000197747 600 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm43148-201ENSMUST00000198237 520 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm43794-201ENSMUST00000200971 692 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm44245-201ENSMUST00000204304 232 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm45299-201ENSMUST00000210199 420 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm8575-201ENSMUST00000210262 521 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms