Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm22932-201ENSMUST00000175510 72 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm27225-201ENSMUST00000183833 557 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm4374-201ENSMUST00000204929 424 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm45690-201ENSMUST00000210775 246 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm6049-201ENSMUST00000222369 458 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm37372-201ENSMUST00000193577 3311 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm37423-201ENSMUST00000194246 3342 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm33167-201ENSMUST00000201933 2643 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm14356-201ENSMUST00000118322 869 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm15838-201ENSMUST00000161575 180 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm8321-201ENSMUST00000181691 980 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm42437-201ENSMUST00000197263 923 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a6Q8C6K9 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 CT010514.1-201ENSMUST00000214088 2969 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm13537-201ENSMUST00000120467 267 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm12399-201ENSMUST00000121475 446 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm17142-201ENSMUST00000164933 645 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Mir7006-201ENSMUST00000183624 69 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm9517-201ENSMUST00000195021 874 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm44184-201ENSMUST00000204290 132 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm19182-201ENSMUST00000207139 577 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm14373-201ENSMUST00000122467 2158 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm37648-201ENSMUST00000192072 2563 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm43876-201ENSMUST00000203831 3229 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm9332-201ENSMUST00000198431 730 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Olfr923-204ENSMUST00000219798 1068 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Gm9788-201ENSMUST00000057038 906 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 AC154828.1-201ENSMUST00000220696 2810 ntBASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a6Q8C6K9 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col6a6Q8C6K9 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Col6a6Q8C6K9 Gm37420-201ENSMUST00000195332 2912 ntBASIC5.59□□□□□ -1.52
Col6a6Q8C6K9 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
Col6a6Q8C6K9 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Col6a6Q8C6K9 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col6a6Q8C6K9 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms