Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim41Q5NCC3 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
Trim41Q5NCC3 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
Trim41Q5NCC3 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 AC118639.1-203ENSMUST00000228425 2016 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Gm12643-201ENSMUST00000116078 374 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Gm13545-201ENSMUST00000119044 482 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Gm6987-201ENSMUST00000119319 428 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Gm8421-201ENSMUST00000119439 305 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Gm12903-201ENSMUST00000121015 544 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Gm26355-201ENSMUST00000158220 105 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Trbv24-201ENSMUST00000194614 347 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Gm36939-201ENSMUST00000194889 439 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Gm36378-201ENSMUST00000201709 388 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Gm44472-201ENSMUST00000204922 943 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Gm3565-201ENSMUST00000222670 609 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 AC123061.2-201ENSMUST00000226234 802 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 CT009600.1-201ENSMUST00000228771 337 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Rny3-201ENSMUST00000083011 102 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 AC161247.1-201ENSMUST00000217744 2295 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC12.83□□□□□ -0.36
Trim41Q5NCC3 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim41Q5NCC3 Gm43571-201ENSMUST00000200067 3098 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm12131-201ENSMUST00000117479 359 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm12402-201ENSMUST00000120536 334 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm4764-201ENSMUST00000130207 1233 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm16138-201ENSMUST00000159341 821 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm23379-201ENSMUST00000180026 107 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm18995-201ENSMUST00000202981 520 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm31861-201ENSMUST00000204563 672 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm4548-201ENSMUST00000208487 509 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 AC165146.1-201ENSMUST00000223777 900 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 AC108947.1-201ENSMUST00000224274 1000 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 AC122309.1-201ENSMUST00000226945 421 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm9762-201ENSMUST00000036976 444 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm42514-201ENSMUST00000196636 1832 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm21043-201ENSMUST00000199316 1517 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Gm10764-202ENSMUST00000220397 2335 ntBASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Trim41Q5NCC3 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms