Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm2959-201ENSMUST00000169844 621 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm37632-201ENSMUST00000191811 1142 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm5324-201ENSMUST00000208115 476 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Gm18469-201ENSMUST00000208850 439 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Gm40598-201ENSMUST00000222953 547 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 CT033778.1-201ENSMUST00000224767 767 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm9800-201ENSMUST00000052615 336 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Sox9Q04887 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Sox9Q04887 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm22865-201ENSMUST00000083949 214 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.02□□□□□ -1.29
Sox9Q04887 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.02□□□□□ -1.29
Sox9Q04887 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Sox9Q04887 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Sox9Q04887 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Sox9Q04887 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
Sox9Q04887 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 AC153143.1-201ENSMUST00000222966 1340 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
Sox9Q04887 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Sox9Q04887 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
Sox9Q04887 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Sox9Q04887 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Sox9Q04887 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Gm2223-201ENSMUST00000112099 1350 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Sox9Q04887 Gm25917-201ENSMUST00000104267 130 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Gm12901-201ENSMUST00000118690 532 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Gm15149-201ENSMUST00000119370 360 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Gm7212-201ENSMUST00000120817 348 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.01□□□□□ -1.29
Sox9Q04887 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Gm23250-201ENSMUST00000157444 267 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Gm24236-201ENSMUST00000157794 134 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Gm22311-201ENSMUST00000158006 110 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Gm9167-201ENSMUST00000182469 962 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC7.01□□□□□ -1.29
Sox9Q04887 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Gm37741-201ENSMUST00000191768 1256 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Gm42580-201ENSMUST00000197223 753 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Gm43295-201ENSMUST00000201439 412 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Gm17838-201ENSMUST00000205872 876 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 AC121986.1-201ENSMUST00000218588 781 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Gm272-201ENSMUST00000222073 919 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Diaph3-206ENSMUST00000226745 713 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Sox9Q04887 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Sox9Q04887 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Sox9Q04887 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Sox9Q04887 Gm25587-201ENSMUST00000082498 166 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Sox9Q04887 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.01□□□□□ -1.29
Sox9Q04887 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Sox9Q04887 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Sox9Q04887 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms