Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm8995-202ENSMUST00000208417 3490 ntBASIC8.9□□□□□ -0.99
Nkx2-3P97334 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Nkx2-3P97334 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.9□□□□□ -0.99
Nkx2-3P97334 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Nkx2-3P97334 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.99
Nkx2-3P97334 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Nkx2-3P97334 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Nkx2-3P97334 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Nkx2-3P97334 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm42998-201ENSMUST00000197053 2371 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm25785-201ENSMUST00000104129 125 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm15181-201ENSMUST00000120142 177 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm13357-201ENSMUST00000120528 537 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm12540-201ENSMUST00000121938 319 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm15038-201ENSMUST00000122144 296 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm13669-201ENSMUST00000122366 457 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm25052-201ENSMUST00000122661 158 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm21241-201ENSMUST00000179551 934 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm43725-201ENSMUST00000200122 369 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm30708-201ENSMUST00000202183 312 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm44163-201ENSMUST00000205140 475 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm5338-201ENSMUST00000209530 639 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm18414-201ENSMUST00000210858 694 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm3912-203ENSMUST00000211024 367 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm18620-201ENSMUST00000222295 324 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 AC154573.2-201ENSMUST00000224174 378 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm13821-201ENSMUST00000202029 3201 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.89□□□□□ -0.99
Nkx2-3P97334 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Nkx2-3P97334 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm37780-201ENSMUST00000194117 1873 ntBASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Snord88a-201ENSMUST00000116723 90 ntBASIC8.88□□□□□ -0.99
Nkx2-3P97334 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm28594-201ENSMUST00000187022 661 ntBASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm28846-201ENSMUST00000189161 368 ntBASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Ighv1-3-201ENSMUST00000192764 302 ntBASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm17935-201ENSMUST00000196649 772 ntBASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm42673-201ENSMUST00000202676 337 ntBASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC8.88□□□□□ -0.99
Nkx2-3P97334 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Nkx2-3P97334 Gm7413-201ENSMUST00000219498 462 ntBASIC8.88□□□□□ -0.99
Nkx2-3P97334 AC107663.1-201ENSMUST00000224257 468 ntBASIC8.88□□□□□ -0.99
Nkx2-3P97334 AC163667.1-201ENSMUST00000225201 1289 ntBASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms